Protein Information

Protein ZmC2H5
ZmC2H5 is a protein in the C2H2 family.
Information
TF Name:	ZmC2H5
Species:	Maize
TF Family:	C2H2
Gene Name(Synonym):	C2H5
Uniprot ID:	A0A1D6PDQ1
Subgenome:	1

Overview of domains present in v5 transcripts
	PF12874
Zm00001eb063930_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d034783	DAPseq	sequence	fimo	position
Zm00001d034783	DAPseq	sequence	fimo	position
Zm00001d034783	ChIPseq	sequence	fimo	position
Zm00001d034783	PChIPseq	sequence	fimo	position

Zm00001eb063930_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MEVCSPSDDVMEAQRRQREPTQAGGCSDDPRAVLTCLTFLEQKIAHLRGIISAAPRPPRQMVSAELSCIAVQLVSLSKSL
AAAGGAADLDDGAARSPAPNDGGDSDSSDHDPFHADADADDDGRLPPAGSYEVIELGEEEILAPHVHSCKVCGKGFKRDA
NLRMHMRGHGEEYKTAAALAKPAAAAAATAQSSSSSSARCFYSCPFVGCKRNREAGAPQLPAAQDGRVRQEPLPAQPLRQ
ELHLPPLQRQALLRARRPAHAREALRTRPLGLLLRHLLLAEGQALRPRRRLRRPRARAAARGRRGCPQCCQWRTRHRLLS
PPDDDGHRGSELGVLLGHHARCSQLF

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF12874
PF12874
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Nucleotide Sequence
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GCACTTCACCCGCCACCACCGACAC...

GCACTTCACCCGCCACCACCGACACACGACGGCACCAGACCAGAGAGAGCAAGCATAAGCAAGAACAGAGATCGGACACGGCCCAGCCAAACCCCCACCCGACCAGCGAGATCAGGCATTGATCGGTTCAGACCGTACGCCATGGAGGTTTGCAGCCCTAGCGATGACGTCATGGAGGCTCAGCGGCGGCAGCGCGAGCCGACCCAAGCCGGGGGCTGCTCCGACGACCCCAGGGCGGTGCTGACGTGCCTCACCTTCCTGGAGCAGAAGATCGCCCACCTCCGCGGCATCATCAGCGCAGCGCCGCGGCCGCCGCGGCAGATGGTGTCGGCCGAGCTCAGCTGCATCGCCGTCCAGCTCGTCTCCCTCTCCAAGAGCCTCGCCGCTGCCGGCGGCGCCGCGGATCTGGACGACGGCGCCGCCCGGTCGCCGGCTCCGAACGACGGCGGCGACAGCGACTCGTCCGACCACGACCCCTTCCACGCCGACGCCGACGCCGACGACGACGGCCGCCTCCCGCCGGCCGGCTCCTACGAGGTGATCGAGCTCGGCGAGGAGGAGATCCTGGCGCCGCACGTGCACTCGTGCAAGGTCTGCGGCAAGGGCTTCAAGCGCGACGCCAACCTGCGCATGCACATGCGCGGCCACGGCGAGGAGTACAAGACGGCGGCCGCGCTCGCCAAGCCCGCCGCCGCGGCCGCGGCCACGGCGCAGTCGTCCTCCTCCTCCTCCGCCCGGTGCTTCTACTCCTGCCCCTTCGTGGGGTGCAAGCGCAACCGGGAGGCGGGAGCACCGCAGCTTCCAGCCGCTCAAGACGGCCGTGTGCGTCAAGAACCACTACCGGCGCAGCCACTGCGACAAGAGCTACACCTGCCGCCGCTGCAACGTCAAGCGCTTCTCCGTGCTCGCCGACCTGCGCACGCACGAGAAGCACTGCGGACGCGACCGCTGGGTCTGCTCCTGCGGCACCTCCTTCTCGCGGAAGGACAAGCTCTTCGCCCACGTCGCCGCCTTCGACGGCCACGCGCCCGCGCTGCCGCCCGAGGACGACGCGGCTGCCCACAATGTTGCCAATGGCGGACTCGGCACCGACTCTTATCGCCGCCTGACGACGATGGACACCGAGGCAGCGAGCTTGGAGTTCTTCTCGGACACCATGCTCGATGCTCTCAGCTGTTCTGACATCGAGGGCTTCGCGCTCATGGATGGACAAGGACAGTGTCTGGACGACGACGGACGAGGGTCGCTCTCACCCTGGCCAGTGGGGCTCGATTCCTGTGACTTTGATGGATTTGATCTCTTCGGGGCACCACCAATCGATTTCTGAACTCAGAATAAGAACCCAAAAAAAAACACAAAGAATGATTTGTCCTCACTCAATTGGCATTAGCATGTAGAACAAGTAGATAAGATCCGGATCACATGCTCACATGTACTTTGATGGATTTGATCGCTTTGAACTACTTCAGCTGTAATTCATGCAAACAAAAACATGACAGCACAGTGGGAGATGCATCAAAGCACAAGGACAGGACCTCACATCACAACAAGACAATGTGGAAATCCAGAGCAGAAGAACAATAGCAAGTCACTGCGGTACCACAGGCCATTCAGGAATTCTGGCCATATTTATTGCAACTCTTTTACAGACAACAGCAGCATGGTTTAGCTCTTGAATCTGTTGTACGTACATAAGAACTAACAGTGGCCAACCCAATATCCAGCAGCTAGCGATTGTGCTACATTCGACAGGTGCTAGCTTACAGAAAAATGGCCAGCAAGCAAAACCAAGTCCCAAGTTCCTGACCAACGATGTGGCGACGAAGAACAAAACCAATCATCATCAGAACCTAACCCAACAGCGGGTGCACTGGGCCATGCAATCCCCTCTGCAGTCAACATTGTAGCCCAGAACCTTGGGGTTCCTCAGCAGAAGGCTCCGCAGGGTCTTCCCGTTTATTCCCCAGTCACTGTCCAGCTTGCCCACATTCGGCCTCACCTCGCCGTCGAGGTCGCACCCAAGAACCTCGGGGAACTTCTTCAGCAGCCTGCCAAGGTCTTCGTCCGACAGCCCCAGGCTCCTGATGTAGTCCAGCACTCCAGCTACCGCCTCGGCGGTCGGAACCTCCTTCTCCCTCTCCTCGCTCCAGTACGGCGAGTGGGTCCAGCCAAACGCTTTCTTCAGCATCTTCTCGGCGTCTTCGCTGGAGAAACCCAATGGAGTGAGCACCCGTTTGCACTCCTCATCTACGTCCAAGGTAGAAGCCTGCGCTTGGTCAGCTGCTGAGAGCGCCCGCCACTCCCGACGACAGCCCCTTTTCCCAGGTTGGATGTTCCGCTGCCGGACATTCGATCTTCCTCCACACTTGTTTTTGTTACCAGGAAGCTTGGCGACC

GRMZM2G470422_T01 from maize genome v3

Related TFome: pUT4706

Amino Acid Sequence
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MEVCSPSDDVMEAQRRQREPTQAGGCSDDPRAVLTCLTFLEQKIAHLRGIISAAPRPPRQMVSAELSCIAVQLVSLSKSL
AAAGGAADLDDGAARSPAPNDGGDSDSSDHDPFHADADADDDGRLPPAGSYEVIELGEEEILAPHVHSCKVCGKGFKRDA
NLRMHMRGHGEEYKTAAALAKPAAAAAATAQSSSSSSARCFYSCPFVGCKRNREAGAPQLPAAQDGRSYTCRRCNVKRFS
VLADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAAFDGHAPALPPEDDAAAHNVANGGLGTDSYRRLTTMDTEAASLE
FFSDTMLDALSCSDIEGFALMDGQGQCLDDDGRGSLSPWPVGLDSCDFDGFDLFGAPPIDF

Nucleotide Sequence
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ATGGAGGTTTGCAGCCCTAGCGATG...

Zm00001d034783_T001 from maize genome v4

Amino Acid Sequence
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MEVCSPSDDVMEAQRRQREPTQAGGCSDDPRAVLTCLTFLEQKIAHLRGIISAAPRPPRQMVSAELSCIAVQLVSLSKSL
AAAGGAADLDDGAARSPAPNDGGDSDSSDHDPFHADADADDDGRLPPAGSYEVIELGEEEILAPHVHSCKVCGKGFKRDA
NLRMHMRGHGEEYKTAAALAKPAAAAAATAQSSSSSSARCFYSCPFVGHCDKSYTCRRCNVKRFSVLADLRTHEKHCGRD
RWVCSCGTSFSRKDKLFAHVAAFDGHAPALPPEDDAAAHNVANGGLGTDSYRRLTTMDTEAASLEFFSDTMLDALSCSDI
EGFALMDGQGQCLDDDGRGSLSPWPVGLDSCDFDGFDLFGAPPIDF

Nucleotide Sequence
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ATGGAGGTTTGCAGCCCTAGCGATG...

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Protein ZmC2H5

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmC2H5 is the regulator

Interactions where ZmC2H5 is the target
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Zm00001eb063930_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G470422_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d034783_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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